Model info
Transcription factorTfe3
ModelTFE3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdGTCACGTGA
Best auROC (human)0.48334283250346294
Best auROC (mouse)0.9998638499122294
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)30
Aligned words478
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyTFE3-like factors{1.2.6.1}
MGI98511
EntrezGene209446
UniProt IDTFE3_MOUSE
UniProt ACQ64092
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.2761499999999995
0.0005 4.30815
0.0001 6.32013
GTEx tissue expression atlas Tfe3 expression
Motifs in JASPAR
PCM
ACGT
01149.020.0226.072.0
0262.05.0396.04.0
0310.013.020.0424.0
048.0443.013.03.0
05449.05.09.04.0
067.0436.07.017.0
0771.09.0380.07.0
088.014.017.0428.0
096.01.0454.06.0
10375.021.057.014.0
PWM
ACGT
010.241-1.7030.654-0.475
02-0.621-2.8961.212-3.062
03-2.328-2.096-1.7031.28
04-2.5181.324-2.096-3.261
051.337-2.896-2.418-3.062
06-2.6291.308-2.629-1.853
07-0.489-2.4181.171-2.629
08-2.518-2.03-1.8531.29
09-2.753-3.8421.348-2.753
101.158-1.658-0.703-2.03