Model info
Transcription factorTGIF1
ModelTGIF1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length7
Quality
A
Motif rank
0
ConsensusWGACAGb
Best auROC (human)0.8611022953749097
Best auROC (mouse)0.9756785769784205
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)5
Aligned words500
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyTGIF{3.1.4.6}
HGNC11776
EntrezGene7050
UniProt IDTGIF1_HUMAN
UniProt ACQ15583
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.451875
0.0005 5.796595
0.0001 7.21926
GTEx tissue expression atlas TGIF1 expression
ReMap ChIP-seq dataset list TGIF1 datasets
Motifs in JASPAR
PCM
ACGT
0183.016.049.0352.0
022.02.0494.02.0
03456.01.043.00.0
0439.0407.045.09.0
05494.01.01.04.0
0644.038.0412.06.0
0759.0223.0158.060.0
PWM
ACGT
01-0.403-1.975-0.9181.027
02-3.573-3.5731.365-3.573
031.285-3.903-1.044-4.4
04-1.1381.172-1.0-2.484
051.365-3.903-3.903-3.126
06-1.022-1.1631.184-2.819
07-0.7370.5730.232-0.721