Model info
Transcription factorUBP1
ModelUBIP1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
D
Motif rank
0
ConsensusnCAGAdA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familyCP2-related factors{6.7.2}
TF subfamilyUBP-1 (LBP-1, SEF){6.7.2.0.3}
HGNC12507
EntrezGene7342
UniProt IDUBIP1_HUMAN
UniProt ACQ9NZI7
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.848215
0.0005 5.543895
0.0001 5.60469
GTEx tissue expression atlas UBP1 expression
ReMap ChIP-seq dataset list UBP1 datasets
Motifs in JASPAR
PCM
ACGT
010.1792.3212.3210.179
020.04.2860.00.714
035.00.00.00.0
040.00.03.5711.429
055.00.00.00.0
062.1430.02.1430.714
074.4640.1790.1790.179
PWM
ACGT
01-1.0450.50.5-1.045
02-1.4131.043-1.413-0.392
031.185-1.413-1.413-1.413
04-1.413-1.4130.8780.103
051.185-1.413-1.413-1.413
060.432-1.4130.432-0.392
071.08-1.045-1.045-1.045