Model info
Transcription factorUsf2
ModelUSF2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length19
Quality
A
Motif rank
0
ConsensusvvGTCACGTGvbvvbbvbb
Best auROC (human)0.9981640365267064
Best auROC (mouse)0.998290171447526
Peak sets in benchmark (human)23
Peak sets in benchmark (mouse)10
Aligned words501
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyUSF factors{1.2.6.2}
MGI99961
EntrezGene22282
UniProt IDUSF2_MOUSE
UniProt ACQ64705
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.00611
0.0005 2.25676
0.0001 4.8080099999999995
GTEx tissue expression atlas Usf2 expression
Motifs in JASPAR
PCM
ACGT
01108.075103.762223.73864.424
02102.14869.523273.06755.262
0357.8568.053432.471.621
047.35223.97118.436450.241
050.864499.1360.00.0
06496.3770.01.7551.868
070.0462.8210.81426.366
0850.9560.0449.0440.0
091.6763.8031.947492.574
100.8970.0497.9021.201
11168.82484.127197.8149.239
1229.19224.309133.239113.263
1359.507232.792166.94940.751
14125.847148.962165.18960.002
1564.042185.309182.62968.021
1663.012164.861192.34679.78
1780.906163.005194.24761.842
1863.555189.516156.60490.325
1961.123137.251192.58109.047
PWM
ACGT
01-0.144-0.1840.577-0.651
02-0.199-0.5770.775-0.801
03-0.756-2.5781.232-3.686
04-2.654-1.601-1.8451.273
05-3.9581.375-4.4-4.4
061.37-4.4-3.644-3.61
07-4.41.3-2.326-1.511
08-0.88-4.41.27-4.4
09-3.668-3.162-3.5881.362
10-3.944-4.41.373-3.827
110.297-0.390.454-0.913
12-1.4150.5790.063-0.097
13-0.7290.6160.286-1.096
140.0070.1730.276-0.721
15-0.6570.390.375-0.598
16-0.6730.2740.427-0.442
17-0.4280.2630.436-0.691
18-0.6650.4120.223-0.32
19-0.7030.0920.428-0.135