Model info
Transcription factorZic1
ModelZIC1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
B
Motif rank
0
ConsensusKGGGWGSKv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words34
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI106683
EntrezGene22771
UniProt IDZIC1_MOUSE
UniProt ACP46684
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.80945
0.0005 5.460915
0.0001 6.6833599999999995
GTEx tissue expression atlas Zic1 expression
Motifs in JASPAR
PCM
ACGT
011.5714.38717.27610.019
022.9241.9528.3780.0
030.00.97531.3020.975
040.01.9531.3020.0
059.9650.9755.84916.463
063.8990.025.4533.899
071.957.79823.5040.0
081.0832.9248.88220.363
097.17614.7589.1252.193
PWM
ACGT
01-1.323-0.5570.6810.17
02-0.883-1.1791.158-2.35
03-2.35-1.6021.253-1.602
04-2.35-1.1791.253-2.35
050.165-1.602-0.3120.635
06-0.655-2.351.053-0.655
07-1.179-0.0580.976-2.35
08-1.545-0.8830.060.838
09-0.1320.5310.085-1.097