Model info
Transcription factorZIC2
ModelZIC2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
D
Motif rank
0
ConsensusdvhhhCCYGCdGdKn
Best auROC (human)0.5444840010087645
Best auROC (mouse)0.9766547543767228
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words410
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
HGNC12873
EntrezGene7546
UniProt IDZIC2_HUMAN
UniProt ACO95409
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.61171
0.0005 5.436909999999999
0.0001 7.15521
GTEx tissue expression atlas ZIC2 expression
ReMap ChIP-seq dataset list ZIC2 datasets
Motifs in JASPAR
PCM
ACGT
0178.064.0161.0107.0
02118.060.0188.044.0
0389.0175.065.081.0
0442.0194.038.0136.0
0578.0156.045.0131.0
066.0374.012.018.0
0719.0371.01.019.0
0834.078.00.0298.0
0933.010.0343.024.0
103.0326.045.036.0
1146.09.046.0309.0
1210.023.0367.010.0
13137.048.074.0151.0
1413.023.0302.072.0
15144.0121.058.087.0
PWM
ACGT
01-0.269-0.4620.4460.042
020.139-0.5250.6-0.827
03-0.1390.529-0.447-0.232
04-0.8720.631-0.9680.279
05-0.2690.415-0.8050.242
06-2.6291.284-2.041-1.674
07-1.6241.276-3.727-1.624
08-1.075-0.269-4.2361.058
09-1.103-2.2021.198-1.406
10-3.1391.147-0.805-1.02
11-0.784-2.293-0.7841.094
12-2.202-1.4461.265-2.202
130.286-0.742-0.320.383
14-1.97-1.4461.071-0.347
150.3360.164-0.558-0.161