Model info
Transcription factorZIM3
ModelZIM3_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
C
Motif rank
0
ConsensusbdRGvTTTCTGTTdhhnbh
Best auROC (human)0.9891535053283426
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words471
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyunclassified{2.3.3.0}
HGNC16366
EntrezGene114026
UniProt IDZIM3_HUMAN
UniProt ACQ96PE6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.02736
0.0005 4.41381
0.0001 7.27791
GTEx tissue expression atlas ZIM3 expression
ReMap ChIP-seq dataset list ZIM3 datasets
Motifs in JASPAR
PCM
ACGT
0160.071.0121.0219.0
0258.039.0115.0259.0
03198.017.0221.035.0
0410.01.0429.031.0
0592.091.0204.084.0
0665.025.09.0372.0
071.01.00.0469.0
085.06.029.0431.0
090.0471.00.00.0
100.00.00.0471.0
111.010.0447.013.0
1217.04.00.0450.0
130.02.00.0469.0
14101.039.0204.0127.0
1561.0228.054.0128.0
1651.0138.033.0249.0
1792.062.092.0225.0
1871.085.0207.0108.0
1962.0193.054.0162.0
PWM
ACGT
01-0.662-0.4970.0270.615
02-0.695-1.079-0.0230.781
030.514-1.8620.624-1.183
04-2.336-3.851.283-1.299
05-0.243-0.2540.544-0.333
06-0.584-1.503-2.4261.141
07-3.85-3.85-4.3511.372
08-2.904-2.761-1.3631.288
09-4.3511.377-4.351-4.351
10-4.351-4.351-4.3511.377
11-3.85-2.3361.324-2.105
12-1.862-3.07-4.3511.331
13-4.351-3.518-4.3511.372
14-0.151-1.0790.5440.075
15-0.6460.655-0.7640.082
16-0.820.157-1.2390.742
17-0.243-0.63-0.2430.641
18-0.497-0.3210.559-0.085
19-0.630.489-0.7640.316