Model info
Transcription factorZNF350
ModelZN350_HUMAN.H11MO.1.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length24
Quality
D
Motif rank
1
ConsensusnSGGGvSRMAGnnvKTTGKbKSCn
Best auROC (human)0.6711644979909291
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words15
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyZNF350-like factors{2.3.3.30}
HGNC16656
EntrezGene59348
UniProt IDZN350_HUMAN
UniProt ACQ9GZX5
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.10496
0.0005 4.9939599999999995
0.0001 6.87201
GTEx tissue expression atlas ZNF350 expression
ReMap ChIP-seq dataset list ZNF350 datasets
Motifs in JASPAR
PCM
ACGT
018.2711.6763.3781.676
022.8727.344.7870.0
031.7020.013.2980.0
040.9570.013.2980.745
050.9570.012.1281.915
064.6813.835.5320.957
073.835.6385.5320.0
082.8720.09.4682.66
092.87210.4260.9570.745
1012.341.7020.00.957
115.5320.09.4680.0
123.830.9576.3833.83
132.662.8724.7874.681
145.7453.6174.6810.957
150.9570.9573.839.255
160.04.7870.010.213
170.00.9570.014.043
180.00.010.3194.681
190.01.7024.6818.617
200.7451.9155.7456.596
210.7451.9158.5113.83
220.9579.4683.830.745
230.013.2980.7450.957
241.8627.6063.671.862
PWM
ACGT
010.704-0.632-0.088-0.632
02-0.2210.5940.211-1.878
03-0.621-1.8781.15-1.878
04-0.996-1.8781.15-1.136
05-0.996-1.8781.062-0.535
060.1910.0180.338-0.996
070.0180.3550.338-1.878
08-0.221-1.8780.829-0.283
09-0.2210.919-0.996-1.136
101.079-0.621-1.878-0.996
110.338-1.8780.829-1.878
120.018-0.9960.4670.018
13-0.283-0.2210.2110.191
140.372-0.030.191-0.996
15-0.996-0.9960.0180.808
16-1.8780.211-1.8780.9
17-1.878-0.996-1.8781.201
18-1.878-1.8780.910.191
19-1.878-0.6210.1910.742
20-1.136-0.5350.3720.496
21-1.136-0.5350.730.018
22-0.9960.8290.018-1.136
23-1.8781.15-1.136-0.996
24-0.5560.627-0.018-0.556