Model info
| Transcription factor | Dbp | ||||||||
| Model | DBP_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vTKRYGTAAbv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 26 | ||||||||
| TF family | C/EBP-related {1.1.8} | ||||||||
| TF subfamily | PAR factors {1.1.8.2} | ||||||||
| MGI | MGI:94866 | ||||||||
| EntrezGene | GeneID:13170 (SSTAR profile) | ||||||||
| UniProt ID | DBP_MOUSE | ||||||||
| UniProt AC | Q60925 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Dbp expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.799 | 5.753 | 10.74 | 0.639 |
| 02 | 1.79 | 0.0 | 1.151 | 21.991 |
| 03 | 2.301 | 1.151 | 2.429 | 19.05 |
| 04 | 15.982 | 1.918 | 4.091 | 2.941 |
| 05 | 0.639 | 3.26 | 2.301 | 18.731 |
| 06 | 2.301 | 0.0 | 21.352 | 1.279 |
| 07 | 0.0 | 11.379 | 0.0 | 13.553 |
| 08 | 22.502 | 1.279 | 0.0 | 1.151 |
| 09 | 23.781 | 0.0 | 0.0 | 1.151 |
| 10 | 2.237 | 8.247 | 6.457 | 7.991 |
| 11 | 9.845 | 6.137 | 4.603 | 4.347 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.201 | -0.071 | 0.495 | -1.584 |
| 02 | -0.998 | -2.169 | -1.281 | 1.175 |
| 03 | -0.818 | -1.281 | -0.778 | 1.037 |
| 04 | 0.869 | -0.95 | -0.363 | -0.631 |
| 05 | -1.584 | -0.549 | -0.818 | 1.021 |
| 06 | -0.818 | -2.169 | 1.147 | -1.218 |
| 07 | -2.169 | 0.549 | -2.169 | 0.713 |
| 08 | 1.198 | -1.218 | -2.169 | -1.281 |
| 09 | 1.251 | -2.169 | -2.169 | -1.281 |
| 10 | -0.839 | 0.252 | 0.031 | 0.223 |
| 11 | 0.414 | -0.014 | -0.264 | -0.312 |