Model info
| Transcription factor | NR3C2 (GeneCards) | ||||||||
| Model | MCR_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 17 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hAGWMCARSTKGTdGKR | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 8 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | GR-like receptors (NR3C) {2.1.1.1} | ||||||||
| HGNC | HGNC:7979 | ||||||||
| EntrezGene | GeneID:4306 (SSTAR profile) | ||||||||
| UniProt ID | MCR_HUMAN | ||||||||
| UniProt AC | P08235 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | NR3C2 expression | ||||||||
| ReMap ChIP-seq dataset list | NR3C2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.722 | 1.722 | 0.722 | 1.833 |
| 02 | 4.889 | 0.0 | 0.0 | 2.111 |
| 03 | 0.889 | 0.0 | 6.111 | 0.0 |
| 04 | 2.889 | 0.0 | 2.0 | 2.111 |
| 05 | 3.222 | 2.889 | 0.889 | 0.0 |
| 06 | 0.0 | 5.222 | 0.889 | 0.889 |
| 07 | 4.111 | 0.0 | 0.0 | 2.889 |
| 08 | 1.389 | 1.167 | 4.167 | 0.278 |
| 09 | 1.167 | 1.389 | 4.167 | 0.278 |
| 10 | 1.278 | 0.278 | 0.278 | 5.167 |
| 11 | 0.0 | 1.111 | 1.778 | 4.111 |
| 12 | 1.111 | 0.0 | 5.889 | 0.0 |
| 13 | 3.111 | 0.0 | 0.0 | 3.889 |
| 14 | 2.0 | 0.0 | 2.0 | 3.0 |
| 15 | 0.0 | 2.111 | 4.889 | 0.0 |
| 16 | 0.889 | 0.0 | 2.0 | 4.111 |
| 17 | 3.278 | 0.278 | 2.278 | 1.167 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.361 | -0.012 | -0.615 | 0.037 |
| 02 | 0.877 | -1.525 | -1.525 | 0.15 |
| 03 | -0.486 | -1.525 | 1.082 | -1.525 |
| 04 | 0.412 | -1.525 | 0.106 | 0.15 |
| 05 | 0.506 | 0.412 | -0.486 | -1.525 |
| 06 | -1.525 | 0.937 | -0.486 | -0.486 |
| 07 | 0.721 | -1.525 | -1.525 | 0.412 |
| 08 | -0.176 | -0.302 | 0.733 | -1.074 |
| 09 | -0.302 | -0.176 | 0.733 | -1.074 |
| 10 | -0.237 | -1.074 | -1.074 | 0.927 |
| 11 | -1.525 | -0.336 | 0.012 | 0.721 |
| 12 | -0.336 | -1.525 | 1.048 | -1.525 |
| 13 | 0.475 | -1.525 | -1.525 | 0.671 |
| 14 | 0.106 | -1.525 | 0.106 | 0.444 |
| 15 | -1.525 | 0.15 | 0.877 | -1.525 |
| 16 | -0.486 | -1.525 | 0.106 | 0.721 |
| 17 | 0.521 | -1.074 | 0.212 | -0.302 |